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  1. pdac-ion-channels-m1 pdac-ion-channels-m1 Public

    Bioinformatics workflow for stromal ion channel analysis in pancreatic ductal adenocarcinoma using single-cell, bulk RNA-seq, and spatial transcriptomics data.

    R

  2. gastric-kcnq1-gse150290 gastric-kcnq1-gse150290 Public

    Single-cell RNA-seq analysis of GSE150290 to study KCNQ1, KCNE2 and KCNE3 along the intestinal vs diffuse tumor axis in gastric cancer.

    R

  3. validation_gastric-kcnq1-gse183904 validation_gastric-kcnq1-gse183904 Public

    Single-cell RNA-Seq Analysis in Gastric Cancer to validate the expression of KCNQ1 & Co in the Intestinal and Diffuse subtypes/EMT

    R

  4. xenium-pdac-gse313662 xenium-pdac-gse313662 Public

    Cell-resolved Xenium analysis of ion-channel expression and stromal cell states in treated pancreatic ductal adenocarcinoma

    Python

  5. xenium-pdac-tumor-stroma-interface-quantification xenium-pdac-tumor-stroma-interface-quantification Public

    Cell-resolved Xenium analysis quantifying KCNMA1 spatial organization in fibroblast niches and its association with the PDAC tumor-stroma interface

    Python