RNA-Seq differential expression analysis of TCGA-COAD (Colorectal Adenocarcinoma) using DESeq2, clusterProfiler, and OncoKB. Includes data preprocessing, normalization, DEG identification, functional enrichment and cancer gene annotation with visualisations.
🧬 Dashboard for exploring reports from RNAsum, a comprehensive pipeline for analysis WGS and WTS-based cancer patient profiles
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Differential expression analysis of papillary thyroid carcinoma dataset obtained from NCBI GEO (GSE224356)
R scripts for preprocessing, pathway scoring, Bayesian modeling, and Cox proportional hazards analyses applied to the SCAPeSCLC dataset, integrating GeoMx Cancer Transcriptome Atlas expression and survival outcomes in ES-SCLC patients treated with chemo-immunotherapy.
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