Multi agent reinforcement learning for intelligent active matter

Python data analysis package for active and soft matter simulations

Active Matter simulation

A Python module intended to make cell segmentation, tracking and subsequent (mostly biophysical) statisticial analysis easy

A simulation framework for nonequilibrium statistical physics

Active Matter Simulation using 2D Vicsek model

Mavi is a Particle Dynamics Engine.

Simulations of flocking behaviour in active agents, using a simple Viscek model

Code developed for a research project at the University of British Columbia focusing on a simple model of active particles, supervised by Jörg Rottler.

Masters thesis: Active matter

Sedimention of active Brownian particles in a box. Codes for numerical simulations and numerical solution of PDEs.

Two-species active Ising model. Codes for numerical simulations and numerical solution of hydrodynamic equations.

Simulation of active particles confined to arbitrary curved surfaces

CUDA Vicsek model simulator

BARCODE (Biomaterial Activity Readouts to Categorize, Optimize, Design and Engineer

Codes used in "Flocking and reorientation transition in the 4-state active Potts model" by S. Chatterjee, M. Mangeat, R. Paul and H. Rieger, published in EPL 130, 66001 (2020); and "Flocking with a q-fold discrete symmetry: Band-to-lane transition in the active Potts model" by M. Mangeat, S. Chatterjee, R. Paul and H. Rieger, published in Phys. …

Code developped for a PhD project at the Université de Montpellier, supervised by Ludovic Berthier (Montpellier) and Robert Jack (Cambridge).

A set of MATLAB codes that simulate a model for the motion of phototactic cyanobacterial cells

Restricted active Potts model. Codes for numerical solution of PDEs.

Code developed for a research project at the University of Cambridge, supervised by Robert Jack.