Pathogen Informatics, Wellcome Sanger Institute
- 157 followers
- Hinxton, Cambs., UK
- http://www.sanger.ac.uk/science/groups/pathogen-informatics
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- gemsweep Public
Nextflow pipeline for deconvoluting mixed sample reads into bins with strain-level resolution.
sanger-pathogens/gemsweep’s past year of commit activity - prefector Public
sanger-pathogens/prefector’s past year of commit activity - dlh-in-a-box-umbrella-helm-chart Public
An Open Source Data Lakehouse Umbrella Helm Chart, dependent on trino, prefect, minio, hive and datahub
sanger-pathogens/dlh-in-a-box-umbrella-helm-chart’s past year of commit activity - nano-rave Public
Nextflow pipeline designed for rapid onsite QC and variant calling of Oxford Nanopore data (following basecalling and demultiplexing with Guppy).
sanger-pathogens/nano-rave’s past year of commit activity - Multiple-mappings-to-bam Public
A GSoC project - Nextflow pipeline updating the legacy Python2 Multiple mappings to bam to nextflow.
sanger-pathogens/Multiple-mappings-to-bam’s past year of commit activity - generate_mags Public
sanger-pathogens/generate_mags’s past year of commit activity - BinBaDGer Public
sanger-pathogens/BinBaDGer’s past year of commit activity
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