All

108 repositories

nf-nomad
Public
Hashicorp Nomad executor plugin for Nextflow
Groovy
•
Apache License 2.0
•6•3•1•2•Updated May 22, 2026May 22, 2026
nextflow
Public
A DSL for data-driven computational pipelines
docker groovy hello
docker groovy hello aws cloud bioinformatics pipeline nextflow hpc reproducible-research
Groovy
•
Apache License 2.0
•784•3.4k•371•94•Updated May 22, 2026May 22, 2026
citations
Public
Generate up to date plots of Nextflow citations, vs. other workflow managers.
Python
•
Apache License 2.0
•0•0•1•0•Updated May 22, 2026May 22, 2026
vscode-language-nextflow
Public
Nextflow language support for Visual Studio Editor
nextflow vscode-extension
nextflow vscode-extension
TypeScript
•
MIT License
•18•37•13•8•Updated May 21, 2026May 21, 2026
summit-website
Public
TypeScript
•5•2•1•1•Updated May 21, 2026May 21, 2026
claude-plugin
Public
Claude Code Plugin for Nextflow
Apache License 2.0
•0•4•0•1•Updated May 20, 2026May 20, 2026
nf-co2footprint
Public
A Nextflow plugin to estimate the CO₂ footprint of pipeline runs.
workflow bioinformatics analysis
workflow bioinformatics analysis nextflow pipelines emissions co2 co2-footprint
HTML
•
Apache License 2.0
•12•27•11•4•Updated May 20, 2026May 20, 2026
schemas
Public
Specifications of Nextflow schemas
nextflow json-schema nf-core
nextflow json-schema nf-core
Shell
•
Apache License 2.0
•1•4•6•2•Updated May 19, 2026May 19, 2026
language-server
Public
The Nextflow language server
nextflow language-server-protocol
nextflow language-server-protocol
Java
•
Apache License 2.0
•7•29•37•12•Updated May 19, 2026May 19, 2026
nf-prov
Public
Nextflow plugin to render provenance reports for pipeline runs. Supports standard formats such as BioCompute Object and Workflow Run RO-Crate.
bioinformatics nextflow pipelines
bioinformatics nextflow pipelines crates provenance workflows research-object biocompute-objects bco biocompute
Groovy
•
Apache License 2.0
•14•30•13•1•Updated May 17, 2026May 17, 2026
plugins
Public
Nextflow plugins index repository
35•6•0•35•Updated May 17, 2026May 17, 2026
training
Public
Nextflow training material
training learning tutorial
training learning tutorial workshop nextflow pipelines teaching workflows
Nextflow
•
Other
•312•245•32•20•Updated May 16, 2026May 16, 2026
nf-ga4gh
Public
GA4GH plugin for Nextflow
Java
•
Apache License 2.0
•5•4•10•2•Updated May 15, 2026May 15, 2026
hyperopt
Public
Nextflow pipeline for hyperparameter optimization of machine learning models
machine-learning nextflow
machine-learning nextflow
Python
•
Mozilla Public License 2.0
•6•25•0•1•Updated May 15, 2026May 15, 2026
rnaseq-nf
Public
A proof of concept of RNAseq pipeline
genomics nextflow rnaseq
genomics nextflow rnaseq
Nextflow
•
Apache License 2.0
•114•84•4•0•Updated May 13, 2026May 13, 2026
hello
Public
Classic hello world script in Nextflow language
nextflow hello-world
nextflow hello-world
Nextflow
•
Apache License 2.0
•124•26•0•6•Updated May 13, 2026May 13, 2026
nf-schema
Public
Functionality for working with pipeline and sample sheet schema files in Nextflow pipelines
workflow bioinformatics schema
workflow bioinformatics schema validation pipeline nextflow json-schema params parameter-validation nextflow-schema
Groovy
•
Apache License 2.0
•31•52•39•4•Updated May 7, 2026May 7, 2026
nf-stress
Public
Docker container used to run Nextflow stress metrics
Nextflow
•
Apache License 2.0
•1•0•0•0•Updated Apr 18, 2026Apr 18, 2026
website
Public
Nextflow public web site
HTML
•142•9•2•15•Updated Apr 11, 2026Apr 11, 2026
k8s-fuse-plugin
Public
Kubernetes device plugin for using /dev/fuse without privileged flag
Go
•
Apache License 2.0
•3•24•4•0•Updated Apr 10, 2026Apr 10, 2026
tree-sitter-nextflow
Public
JavaScript
•2•3•2•0•Updated Apr 7, 2026Apr 7, 2026
.github
Public
Apache License 2.0
•0•1•0•0•Updated Mar 20, 2026Mar 20, 2026
nf-parquet
Public
Plugin implementing the support for Apache Parquet files (experimental)
nextflow parquet
nextflow parquet
Groovy
•
Apache License 2.0
•2•4•1•0•Updated Mar 14, 2026Mar 14, 2026
trademark
Public
Nextflow logo & trademark policy
nextflow
nextflow
3•4•0•0•Updated Mar 4, 2026Mar 4, 2026
nextflow-plugin-gradle
Public
Gradle plugin for making Nextflow plugins
Groovy
•
Apache License 2.0
•0•3•2•2•Updated Dec 16, 2025Dec 16, 2025
test-hello
Public
"hello" project used by Nextflow CI tests
Nextflow
•
Apache License 2.0
•0•0•0•0•Updated Dec 1, 2025Dec 1, 2025
doom
Public
A Nextflow pipeline to play Doom
pipeline nextflow doom
pipeline nextflow doom
Nextflow
•
GNU General Public License v3.0
•0•10•1•0•Updated Dec 1, 2025Dec 1, 2025
nf-plugin-template
Public template
Template project for creating Nextflow plugins (beta)
Groovy
•
Apache License 2.0
•3•1•1•1•Updated Oct 8, 2025Oct 8, 2025
nf-tower
Public
Nextflow plugin providing the support for Tower
Mozilla Public License 2.0
•1•1•0•0•Updated Oct 6, 2025Oct 6, 2025
nf-k8s
Public
Apache License 2.0
•0•0•0•0•Updated Oct 6, 2025Oct 6, 2025

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nextflow-io

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All

108 repositories

nf-nomad

nextflow

citations

vscode-language-nextflow

summit-website

claude-plugin

nf-co2footprint

schemas

language-server

nf-prov

plugins

training

nf-ga4gh

hyperopt

rnaseq-nf

hello

nf-schema

nf-stress

website

k8s-fuse-plugin

tree-sitter-nextflow

.github

nf-parquet

trademark

nextflow-plugin-gradle

test-hello

doom

nf-plugin-template

nf-tower

nf-k8s

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Repositories list

108 repositories