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dependabot/uv/python-packages-d34520ff5b

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@dependabot dependabot Bot commented on behalf of github Jun 4, 2026

Bumps the python-packages group with 6 updates:

Package From To
pandas 3.0.2 3.0.3
poethepoet 0.45.0 0.46.0
ruff 0.15.12 0.15.15
pydata-sphinx-theme 0.17.1 0.18.0
black 26.3.1 26.5.1
jupytext 1.19.1 1.19.3

Updates pandas from 3.0.2 to 3.0.3

Release notes

Sourced from pandas's releases.

pandas 3.0.3

We are pleased to announce the release of pandas 3.0.3. This is a patch release in the 3.0.x series and includes some regression fixes and bug fixes. We recommend that all users of the 3.0.x series upgrade to this version.

See the full whatsnew for a list of all the changes.

Pandas 3.0 supports Python 3.11 and higher. The release can be installed from PyPI:

python -m pip install --upgrade pandas==3.0.*

Or from conda-forge

conda install -c conda-forge pandas=3.0

Please report any issues with the release on the pandas issue tracker.

Thanks to all the contributors who made this release possible.

Commits
  • 72f2fea RLS: 3.0.3 (#65590)
  • 2897590 Backport PR #65436 on branch 3.0.x (Account for privatization of matplotlib `...
  • 49894b5 Backport PR #65499 on branch 3.0.x (BUG: fix check if pyarrow is installed in...
  • 1c6d1e3 [backport 3.0.x] PERF: remove special casing for zoneinfo in tz_localize_to_u...
  • 2a54711 Backport PR #64379 on branch 3.0.x (PERF: improve performance with ZoneInfo t...
  • 036bb7c Backport PR #65482 on branch 3.0.x (PERF: don't call unique on dtypes for che...
  • bf4c182 Backport PR #65410 on branch 3.0.x (TST: also convert str index to object in ...
  • dd02d75 [backport 3.0.x] BUG: keep fsspec OpenFile alive for chained URL reads (#6547...
  • aef3d0f [backport 3.0.x] CI: lowercase types-pymysql/types-pyyaml to fix mamba 2.6.0 ...
  • bb8e248 Backport PR #65399 on branch 3.0.x (DOC: fix source link for classes in the r...
  • Additional commits viewable in compare view

Updates poethepoet from 0.45.0 to 0.46.0

Release notes

Sourced from poethepoet's releases.

0.46.0

Enhancements

Fixes

Experimental agent skill

This release ships an experimental agent skill that gives AI coding agents contextual knowledge of poe's task API when working in projects that use it. It works with any agent that supports the skills convention and aims to improve agent abilities when it comes to leveraging and authoring poe tasks.

Please try it out and provide feedback!

Two install methods:

  1. Via a built in poe task (similar to how shell completions are installed):
poe _install_skill                          # auto-detects .claude/.codex/.pi/.agents and prompts
poe _install_skill ~/.claude/skills         # explicit path (substitute your agent's dir)
poe _install_skill <skills-dir> --upgrade   # non-interactive upgrade (skips if same/newer)
  1. From github via npx skills
npx skills add https://github.com/nat-n/poethepoet/tree/v0.46.0/poethepoet/skills/poethepoet

Full Changelog: nat-n/poethepoet@v0.45.0...v0.46.0

Commits
  • 23a4c1a feat: experimental Claude Code skill and bump-version task (#387)
  • a04a215 refactor: use AST for $POE_EXTRA_ARGS detection and cache parsed content (#388)
  • 61d2e34 refactor: use AST parser for all templating (#386)
  • 1bfad47 fix: make uv and poetry executors check for bat files (#385)
  • 35e4a1b fix: Strip underscore prefix in documentation for private positional args (#383)
  • See full diff in compare view

Updates ruff from 0.15.12 to 0.15.15

Release notes

Sourced from ruff's releases.

0.15.15

Release Notes

Released on 2026-05-28.

Preview features

  • Fix Markdown closing fence handling (#25310)
  • [pyflakes] Report duplicate imports in typing.TYPE_CHECKING block (F811) (#22560)

Bug fixes

  • [pyflakes] Treat function-scope bare annotations as locals per PEP 526 (F821) (#21540)

Performance

  • Avoid redundant TokenValue drops in the lexer (#25300)
  • Reduce memory usage by dropping token-excess capacity and improve performance by approximating the initial tokens Vec size (#25354)
  • Use ThinVec in AST to shrink Stmt (#25361)

Documentation

  • Fix line-length example for --config option (#25389)
  • [flake8-comprehensions] Document RecursionError edge case in __len__ (C416) (#25286)
  • [mccabe] Improve example (C901) (#25287)
  • [pyupgrade] Clarify fix safety docs (UP007, UP045) (#25288)
  • [refurb] Document FURB192 exception change for empty sequences (#25317)
  • [ruff] Document false negative for user-defined types (RUF013) (#25289)

Formatter

  • Fix formatting of lambdas nested within f-strings (#25398)

Server

  • Return code action for codeAction/resolve requests that contain no or no valid URL (#25365)

Other changes

  • Expand semantic syntax errors for invalid walruses (#25415)

Contributors

... (truncated)

Changelog

Sourced from ruff's changelog.

0.15.15

Released on 2026-05-28.

Preview features

  • Fix Markdown closing fence handling (#25310)
  • [pyflakes] Report duplicate imports in typing.TYPE_CHECKING block (F811) (#22560)

Bug fixes

  • [pyflakes] Treat function-scope bare annotations as locals per PEP 526 (F821) (#21540)

Performance

  • Avoid redundant TokenValue drops in the lexer (#25300)
  • Reduce memory usage by dropping token-excess capacity and improve performance by approximating the initial tokens Vec size (#25354)
  • Use ThinVec in AST to shrink Stmt (#25361)

Documentation

  • Fix line-length example for --config option (#25389)
  • [flake8-comprehensions] Document RecursionError edge case in __len__ (C416) (#25286)
  • [mccabe] Improve example (C901) (#25287)
  • [pyupgrade] Clarify fix safety docs (UP007, UP045) (#25288)
  • [refurb] Document FURB192 exception change for empty sequences (#25317)
  • [ruff] Document false negative for user-defined types (RUF013) (#25289)

Formatter

  • Fix formatting of lambdas nested within f-strings (#25398)

Server

  • Return code action for codeAction/resolve requests that contain no or no valid URL (#25365)

Other changes

  • Expand semantic syntax errors for invalid walruses (#25415)

Contributors

... (truncated)

Commits
  • db5aa0a Bump 0.15.15 (#25431)
  • 366fe21 [ty] Improve diagnostics for syntax errors in forward annotations (#25158)
  • e2e1e64 [ty] Remove excess capacity from more Salsa cached collections (#25411)
  • 1bd77e1 [ty] Use diagnostic message as tie breaker when sorting (#25424)
  • 7e1bc1e Add agent skills for working on ty (#25422)
  • 574e107 Expand semantic syntax errors for invalid walruses (#25415)
  • 4a7ca06 [ty] Display docs for matching parameter when hovering over the name of an ar...
  • 5432709 Refine a few agents instructions (#25423)
  • 3cb09eb [ty] Support typing.TypeForm (#25334)
  • c8cd59f [ty] Infer class attributes assigned by metaclass initialization (#25342)
  • Additional commits viewable in compare view

Updates pydata-sphinx-theme from 0.17.1 to 0.18.0

Release notes

Sourced from pydata-sphinx-theme's releases.

v0.18.0

Breaking

Improvements

Bugs

Dependencies

New Contributors

Full Changelog: pydata/pydata-sphinx-theme@v0.17.1...v0.18.0

v0.18.0rc2

What's Changed

... (truncated)

Commits

Updates black from 26.3.1 to 26.5.1

Release notes

Sourced from black's releases.

26.5.1

Stable style

  • Fix unstable formatting of annotated assignments whose subscript annotation contains an inline comment (e.g. x: list[ # pyright: ignore[...]) (#5130)
  • Preserve inline comments (including # type: ignore) immediately before a # fmt: skip line, avoiding AST equivalence failures (#5139)

Packaging

  • Correct the version in the published executables (#5137)

Documentation

  • Add Neovim integration guide covering conform.nvim, ALE, and simple command approaches (#5124)

26.5.0

Highlights

  • Add support for unpacking in comprehensions (PEP 798) and for lazy imports (PEP 810), both new syntactic features in Python 3.15 (#5048)
  • Python 3.15 is now supported. Compiled wheels are not yet provided for Python 3.15, so performance may be slower than on existing Python versions. Wheels will be provided once Python 3.15 is later in its release cycle. (#5127)

Stable style

  • Fix # fmt: skip being ignored in nested if expressions with parenthesized in clauses (#4903)
  • Add syntactic support for Python 3.15 (#5048)
  • Fix crash when an f-string follows a # fmt: off comment inside brackets (#5097)
  • Preserve multiline compound statement headers when # fmt: skip is placed on the colon line (#5117)

Preview style

  • Improve heuristics around whether blank lines should appear before, within and after groups of same-name decorated functions (such as @overload groups) in .pyi stub files (#5021)
  • Fix blank lines being removed between a function and a decorated class in .pyi stub files (#5092)
  • Prevent string merger from creating unsplittable long lines when a pragma comment (e.g. # type: ignore) follows the closing bracket (#5096)

Packaging

Output

... (truncated)

Changelog

Sourced from black's changelog.

Version 26.5.1

Stable style

  • Fix unstable formatting of annotated assignments whose subscript annotation contains an inline comment (e.g. x: list[ # pyright: ignore[...]) (#5130)
  • Preserve inline comments (including # type: ignore) immediately before a # fmt: skip line, avoiding AST equivalence failures (#5139)

Packaging

  • Correct the version in the published executables (#5137)

Documentation

  • Add Neovim integration guide covering conform.nvim, ALE, and simple command approaches (#5124)

Version 26.5.0

Highlights

  • Add support for unpacking in comprehensions (PEP 798) and for lazy imports (PEP 810), both new syntactic features in Python 3.15 (#5048)
  • Python 3.15 is now supported. Compiled wheels are not yet provided for Python 3.15, so performance may be slower than on existing Python versions. Wheels will be provided once Python 3.15 is later in its release cycle. (#5127)

Stable style

  • Fix # fmt: skip being ignored in nested if expressions with parenthesized in clauses (#4903)
  • Add syntactic support for Python 3.15 (#5048)
  • Fix crash when an f-string follows a # fmt: off comment inside brackets (#5097)
  • Preserve multiline compound statement headers when # fmt: skip is placed on the colon line (#5117)

Preview style

  • Improve heuristics around whether blank lines should appear before, within and after groups of same-name decorated functions (such as @overload groups) in .pyi stub files (#5021)
  • Fix blank lines being removed between a function and a decorated class in .pyi stub files (#5092)
  • Prevent string merger from creating unsplittable long lines when a pragma comment (e.g. # type: ignore) follows the closing bracket (#5096)

Packaging

... (truncated)

Commits

Updates jupytext from 1.19.1 to 1.19.3

Release notes

Sourced from jupytext's releases.

Version 1.19.3

Fixed

  • The Jupytext CLI issues a warning when a notebook is not trusted. Also, trust is preserved when empty outputs are added (follow-up on #1505)

Changed

  • The dependabot config has been updated to correctly bump extension packages, now allowing only production updates and ignoring dev dependencies (#1532). Thanks to Mahendra Paipuri for this PR!
  • Removed deprecated stylelint packages (stylelint-config-prettier and stylelint-prettier) from the JupyterLab extension dependencies (#1530)
  • We have removed Python 3.9 testing from the CI (Python 3.9 reached EOL in October 2025)

Version 1.19.2

Fixed

  • Trusted notebooks remain trusted after jupytext --sync (#1505)
  • We have fixed the homepage link in package.json. Thanks to Michał Krassowski for making this PR (#1494)
  • Thanks to Brigitta Sipőcz for fixing a broken link in our CLI (#1428)
  • The --quiet flag now suppresses the creating missing directory warning when writing to a path that includes a prefix (#1533)

Changed

  • The CI workflow has been restructured to maximize parallelization. All test suites (pip, conda, UI) and the build step now run concurrently after pre-commit checks, instead of sequentially, reducing CI times (#1527)
  • We have skipped the tests that involve jupyterfs on Python 3.12+ as they started failing on the CI with no obvious way to fix them (#1509)
  • We have changed the configuration of Dependabot to get grouped dependency updates for our JupyterLab extension.
  • We have merged a series of Dependabot security updates: #1516, #1517, #1519, #1520, #1522, #1524
Changelog

Sourced from jupytext's changelog.

1.19.3 (2026-05-17)

Fixed

  • The Jupytext CLI issues a warning when a notebook is not trusted. Also, trust is preserved when empty outputs are added (follow-up on #1505)

Changed

  • The dependabot config has been updated to correctly bump extension packages, now allowing only production updates and ignoring dev dependencies (#1532). Thanks to Mahendra Paipuri for this PR!
  • Removed deprecated stylelint packages (stylelint-config-prettier and stylelint-prettier) from the JupyterLab extension dependencies (#1530)
  • We have removed Python 3.9 testing from the CI (Python 3.9 reached EOL in October 2025)

1.19.2 (2026-05-10)

Fixed

  • Trusted notebooks remain trusted after jupytext --sync (#1505)
  • We have fixed the homepage link in package.json. Thanks to Michał Krassowski for making this PR (#1494)
  • Thanks to Brigitta Sipőcz for fixing a broken link in our CLI (#1428)
  • The --quiet flag now suppresses the creating missing directory warning when writing to a path that includes a prefix (#1533)

Changed

  • The CI workflow has been restructured to maximize parallelization. All test suites (pip, conda, UI) and the build step now run concurrently after pre-commit checks, instead of sequentially, reducing CI times (#1527)
  • We have skipped the tests that involve jupyterfs on Python 3.12+ as they started failing on the CI with no obvious way to fix them (#1509)
  • We have changed the configuration of Dependabot to get grouped dependency updates for our JupyterLab extension.
  • We have merged a series of Dependabot security updates: #1516, #1517, #1519, #1520, #1522, #1524
Commits
  • 48fdfd8 Fix: Adding cells with no outputs preserves trust status (#1531)
  • 4706e65 chore: Update dependabot config (#1532)
  • 2ec5404 build (deps): Remove deprecated stylelint packages (#1530)
  • 309f97f Version 1.19.2 (#1529)
  • e4dded4 build(deps-dev): bump typescript from 5.9.3 to 6.0.3 in /jupyterlab/packages/...
  • 2c262e5 Fix: --quiet also suppresses warning for directory creation (#1526)
  • 0bfcec1 build(deps): bump fast-uri from 3.1.0 to 3.1.2 in /jupyterlab (#1524)
  • 611e2c0 Explicitly close NotebookNotary signature store (#1528)
  • 70b1f20 All tests run after coverage tests have passed (#1527)
  • 399e934 Close SQLite database connections of Jupytext-created notaries
  • Additional commits viewable in compare view

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@dependabot
Bump the python-packages group with 6 updates
6eb4787 
Bumps the python-packages group with 6 updates:

| Package | From | To |
| --- | --- | --- |
| [pandas](https://github.com/pandas-dev/pandas) | `3.0.2` | `3.0.3` |
| [poethepoet](https://github.com/nat-n/poethepoet) | `0.45.0` | `0.46.0` |
| [ruff](https://github.com/astral-sh/ruff) | `0.15.12` | `0.15.15` |
| [pydata-sphinx-theme](https://github.com/pydata/pydata-sphinx-theme) | `0.17.1` | `0.18.0` |
| [black](https://github.com/psf/black) | `26.3.1` | `26.5.1` |
| [jupytext](https://github.com/mwouts/jupytext) | `1.19.1` | `1.19.3` |


Updates `pandas` from 3.0.2 to 3.0.3
- [Release notes](https://github.com/pandas-dev/pandas/releases)
- [Commits](pandas-dev/pandas@v3.0.2...v3.0.3)

Updates `poethepoet` from 0.45.0 to 0.46.0
- [Release notes](https://github.com/nat-n/poethepoet/releases)
- [Commits](nat-n/poethepoet@v0.45.0...v0.46.0)

Updates `ruff` from 0.15.12 to 0.15.15
- [Release notes](https://github.com/astral-sh/ruff/releases)
- [Changelog](https://github.com/astral-sh/ruff/blob/main/CHANGELOG.md)
- [Commits](astral-sh/ruff@0.15.12...0.15.15)

Updates `pydata-sphinx-theme` from 0.17.1 to 0.18.0
- [Release notes](https://github.com/pydata/pydata-sphinx-theme/releases)
- [Changelog](https://github.com/pydata/pydata-sphinx-theme/blob/main/RELEASE.md)
- [Commits](pydata/pydata-sphinx-theme@v0.17.1...v0.18.0)

Updates `black` from 26.3.1 to 26.5.1
- [Release notes](https://github.com/psf/black/releases)
- [Changelog](https://github.com/psf/black/blob/main/CHANGES.md)
- [Commits](psf/black@26.3.1...26.5.1)

Updates `jupytext` from 1.19.1 to 1.19.3
- [Release notes](https://github.com/mwouts/jupytext/releases)
- [Changelog](https://github.com/mwouts/jupytext/blob/main/CHANGELOG.md)
- [Commits](mwouts/jupytext@v1.19.1...v1.19.3)

---
updated-dependencies:
- dependency-name: pandas
  dependency-version: 3.0.3
  dependency-type: direct:production
  update-type: version-update:semver-patch
  dependency-group: python-packages
- dependency-name: poethepoet
  dependency-version: 0.46.0
  dependency-type: direct:development
  update-type: version-update:semver-minor
  dependency-group: python-packages
- dependency-name: ruff
  dependency-version: 0.15.15
  dependency-type: direct:development
  update-type: version-update:semver-patch
  dependency-group: python-packages
- dependency-name: pydata-sphinx-theme
  dependency-version: 0.18.0
  dependency-type: direct:development
  update-type: version-update:semver-minor
  dependency-group: python-packages
- dependency-name: black
  dependency-version: 26.5.1
  dependency-type: direct:development
  update-type: version-update:semver-minor
  dependency-group: python-packages
- dependency-name: jupytext
  dependency-version: 1.19.3
  dependency-type: direct:development
  update-type: version-update:semver-patch
  dependency-group: python-packages
...

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@dependabot dependabot Bot added dependencies Pull requests that update a dependency file python:uv Pull requests that update python:uv code labels Jun 4, 2026
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