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Save BiocPy objects as RDS files#76

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jkanche merged 18 commits into
masterfrom
save-rds
Jun 19, 2026
Merged

Save BiocPy objects as RDS files#76
jkanche merged 18 commits into
masterfrom
save-rds

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@jkanche

@jkanche jkanche commented Jun 16, 2026

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@jkanche jkanche self-assigned this Jun 16, 2026
@jkanche jkanche changed the title Implement saving BiocPy objects as RDS files Save BiocPy objects as RDS files Jun 16, 2026
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codecov Bot commented Jun 16, 2026

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Codecov Report

❌ Patch coverage is 85.22013% with 47 lines in your changes missing coverage. Please review.
✅ Project coverage is 83.54%. Comparing base (9c5c13b) to head (bfddc29).

Files with missing lines Patch % Lines
src/rds2py/save_granges.py 73.17% 5 Missing and 6 partials ⚠️
src/rds2py/save_compressed_list.py 76.66% 3 Missing and 4 partials ⚠️
src/rds2py/save_delayed_matrix.py 75.00% 2 Missing and 5 partials ⚠️
src/rds2py/save_rle.py 73.68% 2 Missing and 3 partials ⚠️
src/rds2py/save_se.py 83.33% 2 Missing and 3 partials ⚠️
src/rds2py/save_frame.py 82.35% 1 Missing and 2 partials ⚠️
src/rds2py/save_sce.py 84.21% 1 Missing and 2 partials ⚠️
src/rds2py/save_atomic.py 95.55% 0 Missing and 2 partials ⚠️
src/rds2py/save_dict.py 92.85% 1 Missing and 1 partial ⚠️
src/rds2py/save_factor.py 92.30% 0 Missing and 1 partial ⚠️
... and 1 more
Additional details and impacted files
@@            Coverage Diff             @@
##           master      #76      +/-   ##
==========================================
+ Coverage   80.16%   83.54%   +3.38%     
==========================================
  Files          17       29      +12     
  Lines         610      924     +314     
  Branches       93      137      +44     
==========================================
+ Hits          489      772     +283     
+ Misses         75       74       -1     
- Partials       46       78      +32     

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@jkanche jkanche marked this pull request as ready for review June 19, 2026 06:06
@jkanche jkanche merged commit 040a012 into master Jun 19, 2026
16 checks passed
@jkanche jkanche deleted the save-rds branch June 19, 2026 06:48
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