diff --git a/src/org/labkey/targetedms/TargetedMSManager.java b/src/org/labkey/targetedms/TargetedMSManager.java index 2266b4faf..986230427 100644 --- a/src/org/labkey/targetedms/TargetedMSManager.java +++ b/src/org/labkey/targetedms/TargetedMSManager.java @@ -1272,7 +1272,7 @@ public List getNickname(String name, TargetedMSSchema schema "FROM targetedms.SampleFile WHERE InstrumentNickname = " + new StandardDialectStringHandler().quoteStringLiteral(name) + " ORDER By InstrumentNickname, InstrumentId.Model, InstrumentSerialNumber"; - TableSelector selector = QueryService.get().selector(schema, sql); + SqlSelector selector = QueryService.get().getSelectBuilder(schema, sql).buildSqlSelector(); result = selector.getArrayList(InstrumentNickname.class); Container targetContainer; if (shared.hasPermission(schema.getUser(), UpdatePermission.class)) diff --git a/src/org/labkey/targetedms/folderImport/PanoramaQCSettings.java b/src/org/labkey/targetedms/folderImport/PanoramaQCSettings.java index 4a43e4608..81780ac31 100644 --- a/src/org/labkey/targetedms/folderImport/PanoramaQCSettings.java +++ b/src/org/labkey/targetedms/folderImport/PanoramaQCSettings.java @@ -89,7 +89,7 @@ public void exportSettings(VirtualFile vf, Container container, User user) throw .append(TargetedMSManager.getTableInfoQCMetricConfiguration(), "qcMetricConfig") .append(" ON qcEnabledMetrics.metric = qcMetricConfig.Id"); - try (Results results = QueryService.get().selectResults(schema, sql.getSQL(), null, null, true, true)) + try (Results results = QueryService.get().getSelectBuilder(schema, sql.getSQL(), true).select()) { exportSettingsToTSV(vf, results, getSettingsFileName(), getTableName()); } @@ -146,7 +146,7 @@ public void exportSettings(VirtualFile vf, Container container, User user) throw .append(" ) qcAnnotationType") .append(" ON qcAnnotation.QCAnnotationTypeId = qcAnnotationType.Id"); - try (Results results = QueryService.get().selectResults(schema, sql.getSQL(), null, null, true, true)) + try (Results results = QueryService.get().getSelectBuilder(schema, sql.getSQL(), true).select()) { exportSettingsToTSV(vf, results, getSettingsFileName(), getTableName()); } @@ -188,7 +188,7 @@ public void exportSettings(VirtualFile vf, Container container, User user) throw .append(TargetedMSManager.getTableInfoRuns(), "runs") .append(" ON replicate.RunId = runs.Id"); - try (Results results = QueryService.get().selectResults(schema, sql.getSQL(), null, null, true, true)) + try (Results results = QueryService.get().getSelectBuilder(schema, sql.getSQL(), true).select()) { exportSettingsToTSV(vf, results, getSettingsFileName(), getTableName()); }